Did you try to perform an Upload? Before I explain, you should NOT perform the following tasks during heavy traffic on the 4K; but rather wait until after hours when there is little to no traffic!!
When you perform Moves, Adds, Changes via AMO on a HiPath 4000, you are writing directly to the active Switching Unit memory. The contents of this memory should be frequently copied to the Hard Drive using AMO UPDAT, usually performed on a schedule (see DIS-UPDAT). Assistant also needs a copy of this database, so it uses AMO UPLO2 to fetch a copy each evening. Occasionally the three copies of the database (SWU, Hard Drive partition E, Assistant/Informix) can get out of sync, meaning that the three copies are not "equal". You must assume that the database within the active Switching Unit is always accurate; therefore perform a EX-UPDAT:BP,ALL; twice, and then a EX-UPDAT:A1,ALL; twice to update the hard drive partition E. Next, manually trigger an "upload" from Assistant by clicking Configuration Management > Network > System, and perform a Search. There you should see the status of the Informix database within Assistant. If you see "Synchronized" in each and every component of the database ("Stations" for example), then typically no upload is necessary. (In your situation, regardless of the statuses, you should start an Upload All.) For any other status, start an Upload All by clicking "Action" on the upper action bar, then click "Upload". If prompted whether to run an Upload All or Upload Delta, you should select Upload All in your situation. When done, you should see "Synchronized" in all of the database component fields. Then you might see the overall status of "Backup Required", which means the database needs to be saved to the hard drive (AMO UPDAT), even though you may have performed this task manually already. To satisfy Assistant, you should perform a "SAVE" from this same window, again by clicking "Action" on the upper action bar, then click "SAVE". The status should update to "Synchronized" when done.
This may not resolve the problem - you could have a more serious database problem. SEN may have to perform a GENDB, which means that your database is re-generated. Usually this action resolves most database problems. Must be done during OFF-HOURS. System will be down during this process.
Please re-post if/when problem is resolved, OR if I have mis-judged the problem. Good luck.